Information for 2-YTDAGMCT (Motif 2)

A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T
Reverse Opposite:
C G T A A T C G C A G T A T G C G A C T G T A C C T G A T C A G
p-value:1e-49
log p-value:-1.150e+02
Information Content per bp:1.439
Number of Target Sequences with motif493.0
Percentage of Target Sequences with motif75.73%
Number of Background Sequences with motif13153.2
Percentage of Background Sequences with motif46.64%
Average Position of motif in Targets345.9 +/- 252.4bp
Average Position of motif in Background267.6 +/- 280.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)2.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTDAGMCT
CNAGGCCT
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----YTDAGMCT---
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YTDAGMCT
CTAGGCCT
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----YTDAGMCT---
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----YTDAGMCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

WRKY40/MA1085.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YTDAGMCT--
NNTTGACTTN
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T A C G T
G C A T C A G T C G A T C G A T A C T G C G T A A G T C A C G T G C A T C G A T

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----YTDAGMCT-
GTCCTTGAGCCCG
 A C G T A C G T A C G T A C G T A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YTDAGMCT
CTGACACY
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T
A G T C A C G T C T A G C G T A A G T C C G T A A G T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTDAGMCT-
-BCAGACWA
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ARG80/MA0271.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:YTDAGMCT-
---AGACGC
 A G T C G A C T C A T G C T G A T A C G G T C A T A G C G C A T A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A G T C C A T G A G T C