Information for 2-TTCTTTTTTTTT (Motif 6)

A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T
Reverse Opposite:
T G C A T G C A T G C A C T G A T G C A G T C A T G C A T C G A C T G A A T C G T G C A T C G A
p-value:1e-40
log p-value:-9.252e+01
Information Content per bp:1.509
Number of Target Sequences with motif557.0
Percentage of Target Sequences with motif85.56%
Number of Background Sequences with motif17352.8
Percentage of Background Sequences with motif61.53%
Average Position of motif in Targets349.9 +/- 249.1bp
Average Position of motif in Background283.7 +/- 289.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.99
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AZF1/MA0277.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTTTTTTTT
TTTCTTTTT----
 A C G T A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SeqBias: polyA-repeat

Match Rank:2
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TTCTTTTTTTTT-
---TTTTTTTTTT
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.79
Offset:3
Orientation:forward strand
Alignment:TTCTTTTTTTTT-
---TTTTTTTTTT
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF384/MA1125.1/Jaspar

Match Rank:4
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TTCTTTTTTTTT---
---TTTTTTTTTANN
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:TTCTTTTTTTTT
----TTTTTTTT
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T A C G T C G A T A C G T A C G T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCTTTTTTTTT-----
NNNNTTTTTTTTTNAAC
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Adof1/MA1277.1/Jaspar

Match Rank:7
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------TTCTTTTTTTTT--
TTTTTTTTACTTTTTNTTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G A C T C G A T G A C T G A C T G C A T C T G A A G T C A G C T A C G T A C G T G C A T G A C T A G T C G C A T G A C T G A C T G C A T G C A T

AP1/MA0940.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTTTTTTTT
TTTCCTTTTTTGG
 A C G T A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T
G C A T A G C T A G C T G A T C G A T C G C A T G A C T G C A T G C A T G C A T C G A T C T A G C A T G

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCTTTTTTTTT---
NTNTTGTTGTTTGTN
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

HuR(RRM)/Homo_sapiens-RNCMPT00274-PBM/HughesRNA

Match Rank:10
Score:0.73
Offset:5
Orientation:forward strand
Alignment:TTCTTTTTTTTT
-----TTTTTTT
 A G C T A C G T T A G C G A C T A G C T A C G T C A G T A C G T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G A T C A G T A C G T A G C T A C G T