Information for 5-KTTTKTGT (Motif 9)

C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
Reverse Opposite:
G C T A A G T C C G T A G T A C C T G A C T G A C G T A G T C A
p-value:1e-33
log p-value:-7.606e+01
Information Content per bp:1.704
Number of Target Sequences with motif485.0
Percentage of Target Sequences with motif74.50%
Number of Background Sequences with motif14409.1
Percentage of Background Sequences with motif51.10%
Average Position of motif in Targets352.2 +/- 262.0bp
Average Position of motif in Background272.9 +/- 280.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETR-1(RRM)/Caenorhabditis_elegans-RNCMPT00183-PBM/HughesRNA

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT
-TTTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:KTTTKTGT
-NTTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A G C T A G C T A G C T A C T G A C G T A C T G A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00270-PBM/HughesRNA

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT
-TGTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T C A T G A C G T C T A G A C G T A C T G A C G T

CNOT4(RRM)/Drosophila_melanogaster-RNCMPT00008-PBM/HughesRNA

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:KTTTKTGT
-TATGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T C G A T C G T A A C G T A C T G A C G T A T C G A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00003-PBM/HughesRNA

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT
-TGTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT-
-TGTGTGTT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T A C G T
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T

Tv_0258(RRM)/Trichomonas_vaginalis-RNCMPT00258-PBM/HughesRNA

Match Rank:7
Score:0.77
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT
-TGTTTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T A C T G A C G T A G C T A C G T A C T G C G A T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:8
Score:0.77
Offset:1
Orientation:forward strand
Alignment:KTTTKTGT
-TGTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KTTTKTGT
-TGTGTGT
 C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T
A C G T A C G T A C T G C G A T C T A G A C G T C A T G A C G T

NDT80/MA0343.1/Jaspar

Match Rank:10
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------KTTTKTGT-------
TNNCGTTTTTGTGGCCGGANN
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T G A C T G A C T A C T G C G A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C T G A T G C C T A G C G A T A G C T G C A T G A C T G C A T A C T G A G C T C T A G A C T G G A T C T G A C C A T G C T A G T C G A C T G A C G T A