Information for 1-GHCACGTG (Motif 1)

T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G
Reverse Opposite:
G T A C T G C A A T G C A C T G C G A T C A T G C G T A A G T C
p-value:1e-37
log p-value:-8.744e+01
Information Content per bp:1.725
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif61.08%
Number of Background Sequences with motif4604.8
Percentage of Background Sequences with motif16.20%
Average Position of motif in Targets284.2 +/- 180.8bp
Average Position of motif in Background237.2 +/- 242.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.63
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GHCACGTG
GHCACGTG
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

Arnt/MA0004.1/Jaspar

Match Rank:2
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:GHCACGTG
--CACGTG
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G
A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GHCACGTG
GNCACGTG
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

BEE2/MA0956.1/Jaspar

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GHCACGTG--
AGCACGTGCT
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
G C T A A T C G G T A C C G T A G A T C C T A G G C A T C A T G T A G C C G A T

ARNT2/MA1464.1/Jaspar

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHCACGTG--
GTCACGTGCC
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
T C A G C G A T T G A C C T G A A G T C C T A G G A C T C A T G G T A C A T G C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:GHCACGTG--
--CACGTGBN
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

PHYPADRAFT_143875/MA0988.1/Jaspar

Match Rank:7
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHCACGTG--
CGCACGTGCG
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
G A T C T A C G G T A C C G T A G A T C C T A G G C A T C A T G A T G C C T A G

BIM2/MA0965.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHCACGTG--
GGCACGTGCC
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
T A C G C A T G G T A C C T G A G A T C C T A G G A C T C A T G G T A C A T G C

ABI5/MA0931.1/Jaspar

Match Rank:9
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GHCACGTG-
TGACACGTGG
 A C G T T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T
A C G T A C T G G T C A A T G C C G T A A G T C A C T G A C G T C T A G A C T G

BIM3/MA0966.1/Jaspar

Match Rank:10
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GHCACGTG--
AGCACGTGCT
 T C A G G C A T G T A C C G T A G T A C A T C G A C G T C A T G A C G T A C G T
C T G A A C T G G A T C C G T A G A T C C T A G G C A T C T A G T G A C G A C T