Information for 4-GCTGCTTG (Motif 5)

C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
Reverse Opposite:
T A G C G T C A C T G A A T C G A T G C C G T A A C T G A G T C
p-value:1e-15
log p-value:-3.524e+01
Information Content per bp:1.795
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif46.71%
Number of Background Sequences with motif5390.7
Percentage of Background Sequences with motif18.96%
Average Position of motif in Targets311.4 +/- 213.6bp
Average Position of motif in Background253.5 +/- 258.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTTG-----
VHNHTGCTTGNYNNY
 A C G T A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A G T C G C A T A C G T A C T G A G T C A C G T A C G T A C T G C A T G A G C T G T A C A C G T A G C T

MBNL1(Znf)/Homo_sapiens-RNCMPT00038-PBM/HughesRNA

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCTGCTTG-
--NGCTTGC
 C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G A C G T
A C G T A C G T C G T A A T C G A G T C A C G T A C G T C T A G A T G C

SWI5(MacIsaac)/Yeast

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTTG
TGCTGGTT-
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
A C G T T C A G A G T C A C G T C A T G T C A G G A C T A C G T A C G T

SWI5/MA0402.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTTG
TGCTGGTT-
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
A C G T A C T G A G T C A C G T A C T G A C T G A C G T G A C T A C G T

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTTG
TGCTGGT--
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T

ACE2/MA0267.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTTG
TGCTGGT--
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
A C G T A C T G A G T C A C G T A C T G A T C G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTTG
AGCAGCTGCT--
 A C G T A C G T A C G T A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTTG
NGCTN----
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

ACE2(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTTG
GGCGGGTT-
 A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G
C A T G T C A G A G T C C A T G C T A G T C A G A G C T A G C T A C G T

ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTTG-
ATGGCKGCTDHW
 A C G T A C G T A C G T C T A G A G T C G C A T A T C G T A G C G A C T A C G T A T C G A C G T
C T G A G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C G T C T G A G C T A C G T A