Information for 5-CMCAYSRCRTAT (Motif 11)

A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G A G T C A T G C C T A G A C G T A C T G A C G T A C T G
p-value:1e-1
log p-value:-4.500e+00
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif183.3
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets169.2 +/- 61.1bp
Average Position of motif in Background190.3 +/- 195.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SKO1(MacIsaac)/Yeast

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CMCAYSRCRTAT
---ATGACGTA-
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T
A C G T A C G T A C G T C T G A A G C T A C T G C T G A A G T C C T A G G A C T C T G A A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CMCAYSRCRTAT---
-----GACATATGTT
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

NEUROG1/MA0623.2/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CMCAYSRCRTAT---
-----GACATATGTC
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

MXI1/MA1108.2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CMCAYSRCRTAT
GACACATGGC----
 A C G T A C G T A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CMCAYSRCRTAT---
-----GCCATATGGT
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CMCAYSRCRTAT---
-----ANCATATGGT
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CMCAYSRCRTAT
--CACCGCTT--
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T
A C G T A C G T T G A C C T G A A G T C A G T C A C T G G A T C G A C T G C A T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CMCAYSRCRTAT--
------ACATATGG
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CMCAYSRCRTAT---
-----ANCATATGTT
 A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

USF1/MA0093.3/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CMCAYSRCRTAT
NNGTCACATGACNN--
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C A T C G C T A G A G T C C T A G A C G T C G T A A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A A C G T A C G T