Information for 1-CACGTGYH (Motif 1)

G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
Reverse Opposite:
C A T G C T G A T G A C C T G A G T A C A T C G C G A T C A T G
p-value:1e-44
log p-value:-1.035e+02
Information Content per bp:1.709
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif75.00%
Number of Background Sequences with motif3175.3
Percentage of Background Sequences with motif12.71%
Average Position of motif in Targets213.4 +/- 154.9bp
Average Position of motif in Background227.6 +/- 261.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt/MA0004.1/Jaspar

Match Rank:1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:CACGTGYH
CACGTG--
 G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:CACGTGYH
CACGTGBN
 G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGYH
CACGTGNC
 G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

PHYPADRAFT_143875/MA0988.1/Jaspar

Match Rank:4
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CACGTGYH
CGCACGTGCG
 A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
G A T C T A C G G T A C C G T A G A T C C T A G G C A T C A T G A T G C C T A G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGYH
CACGTGDC
 G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CACGTGYH
ACCACGTGCC
 A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.98
Offset:-4
Orientation:forward strand
Alignment:----CACGTGYH---
NNNNCACGTGNNNNN
 A C G T A C G T A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C A C G T A C G T A C G T
C G A T G C A T A G T C T C A G G A T C C G T A G A T C C T A G G C A T C T A G A G C T T C G A C G T A G C T A G C A T

BEE2/MA0956.1/Jaspar

Match Rank:8
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CACGTGYH
AGCACGTGCT
 A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
G C T A A T C G G T A C C G T A G A T C C T A G G C A T C A T G T A G C C G A T

BIM3/MA0966.1/Jaspar

Match Rank:9
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--CACGTGYH
AGCACGTGCT
 A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C
C T G A A C T G G A T C C G T A G A T C C T A G G C A T C T A G T G A C G A C T

At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.98
Offset:-3
Orientation:reverse strand
Alignment:---CACGTGYH----
NNNCACGTGNNNNNN
 A C G T A C G T A C G T G T A C G C T A A T G C A C T G A G C T A C T G G A C T G T A C A C G T A C G T A C G T A C G T
C G A T A G T C C T G A G A T C C G T A G A T C C T A G G A C T C T A G G A C T T C A G G C T A G C T A G C A T G C T A