Information for 4-CGCCGGAG (Motif 4)

G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
Reverse Opposite:
G T A C A G C T A G T C G T A C C T A G C T A G A G T C C A T G
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.780
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif28.00%
Number of Background Sequences with motif2512.6
Percentage of Background Sequences with motif10.06%
Average Position of motif in Targets265.8 +/- 245.0bp
Average Position of motif in Background264.6 +/- 338.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGGAG-
TCGCCGGAGA
 A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G A C G T
G A C T A T G C C T A G G A T C G A T C C T A G C A T G T C G A C T A G C G T A

YDR520C(MacIsaac)/Yeast

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGGAG-
TCCGCCGGAGA
 A C G T A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G A C G T
C G A T G A T C A G T C A C T G A T G C A G T C A C T G C T A G G T C A C T A G G T C A

LBD18/MA1673.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCCGGAG---
TCGCCGGAAAAT
 A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G A C G T A C G T A C G T
G A C T G A T C C T A G A T G C T A G C C A T G A C T G C G T A C T G A G C T A G C T A C G A T

AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGGAG------
TCKCCGGMGAHDNHD
 A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C A T G A G T C A G T C A C T G A C T G G T C A C T A G C T G A G C T A C T G A C G A T G C A T C G T A

CAT8/MA0280.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CGCCGGAG
--CCGGAA
 G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
A C G T A C G T A G T C A G T C A C T G A C T G T C G A C T G A

YLR278C/MA0430.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CGCCGGAG--
--CCGGAGTT
 G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G A C G T A C G T
A C G T A C G T A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T

YER184C/MA0424.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCCGGAG
TTCCGGAN
 G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
A G C T A C G T A G T C A G T C A C T G T A C G T C G A C A T G

SIP4/MA0380.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGCCGGAG
-TCCGGAG
 G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
A C G T A G C T G A T C A G T C A C T G C T A G C T G A T C A G

brk/dmmpmm(Down)/fly

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGGAG
AGCGCCGG--
 A C G T A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
T C G A C A T G G T A C T A C G G A T C A T G C C T A G A T C G A C G T A C G T

ERF069/MA0997.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGCCGGAG
GCGCCGCCA
 A C G T G T A C A C T G G A T C G A T C A C T G T C A G T C G A C A T G
A T C G T G A C C T A G T A G C G A T C C T A G A G T C T G A C C T G A