Information for 5-CCGACCAAGC (Motif 8)

G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A G C T A C T G A C T G A C G T A G T C A C T G A C T G
p-value:1e-1
log p-value:-3.987e+00
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif518.5
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets163.4 +/- 79.8bp
Average Position of motif in Background199.6 +/- 248.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF018/MA1048.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CCGACCAAGC
ACCGACCA---
 A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
C T G A A G T C T G A C A C T G C G T A G A T C G T A C C G T A A C G T A C G T A C G T

At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CCGACCAAGC
DCCACCGACCAW--
 A C G T A C G T A C G T A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
C A T G A T G C T A G C C T G A A G T C A G T C A C T G G C T A A G T C G T A C G C T A G C A T A C G T A C G T

At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCGACCAAGC
HCACCGACCAHN-
 A C G T A C G T A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
G A C T G A T C C T G A A G T C A G T C A C T G C G T A A G T C G T A C G C T A G C A T C G A T A C G T

ARF18/MA1689.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGACCAAGC-
ACCCGACAAAAAT
 A C G T A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C A C G T
C G T A T A G C G A T C T G A C C T A G T C G A A T G C T G C A T C G A T C G A T C G A C G T A C G A T

ARF5/MA0943.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCGACCAAGC
GCCGACAA---
 A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
T C A G T A G C T G A C C T A G C T G A A G T C G T C A C T G A A C G T A C G T A C G T

schlank/MA0193.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCGACCAAGC
-CTACCAA--
 G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
A C G T A G T C A G C T G T C A G T A C A G T C C T G A C T G A A C G T A C G T

CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCGACCAAGC
CACCGACAWW--
 A C G T A C G T G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
G T A C C T G A T G A C G A T C C A T G G C T A G T A C G T C A G C T A C G A T A C G T A C G T

MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGACCAAGC
CCYACCTAMC
 G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
A G T C A G T C G A T C G C T A G T A C G A T C G C A T T G C A G T A C G A T C

P(MYB)/Zea mays/AthaMap

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCGACCAAGC--
---ACCTACCCG
 G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A G T C C G A T C G T A A G T C G A T C G T A C A T C G

HAP2/MA0313.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCGACCAAGC
---ACCAA--
 G T A C A G T C C T A G C G T A A G T C A G T C C T G A G T C A A T C G A G T C
A C G T A C G T A C G T C T G A G T A C A G T C G T C A C G T A A C G T A C G T