BioResearcherSkills
Five independently versioned skills. Each page links the full SKILL.md contract; deep documentation lives in the repository.
bioresearcher-deep-research v1.1.1
Deep biomedical research orchestrator powered by the biomcp MCP server: clarifies the question, decomposes the topic into 2-5 research aspects, researches each aspect via parallel subagents (sequential fallback), and syn…
bioresearcher-onboard v1.1.0
Bootstraps a project-local biomcp MCP server runtime in .bioresearcher-runtime/: downloads portable Node.js 22 (if missing), vendors biomcp with fast mirror support (official or npmmirror), configures optional features (…
bioresearcher-plot-making v1.0.0
Biomedical visualization router and plotting engine: classifies research data and produces publication-ready scientific figures (structural protein-binder complexes, conformational dynamics, literature method summaries, …
bioresearcher-pubmed-weekly v1.0.0
Downloads the past week's PubMed daily update XML.gz files from ftp.ncbi.nlm.nih.gov/pubmed/updatefiles/, streams-parses interleaved PubmedArticle and DeleteCitation records, and produces one combined Excel workbook plus…
bioresearcher-python-setup-uv v1.1.0
Sets up a project-local Python environment with the uv package manager: downloads uv binary from astral.sh, creates .venv, configures dependencies (pandas or scientific plotting: pymol-open-source, matplotlib, pymupdf, b…